Package: RCytoGPS 1.2.10

Kevin R. Coombes

RCytoGPS: Using Cytogenetics Data in R

Defines classes and methods to process text-based cytogenetics using the CytoGPS web site, then import the results into R for further analysis and graphing.

Authors:Kevin R. Coombes [aut, cre], Dwayne Tally [aut]

RCytoGPS_1.2.10.tar.gz
RCytoGPS_1.2.10.tar.gz(r-4.6-any)RCytoGPS_1.2.10.tar.gz(r-4.5-any)
RCytoGPS_1.2.10.tgz(r-4.5-emscripten)
RCytoGPS.pdf |RCytoGPS.html✨
RCytoGPS/json (API)
NEWS

# Install 'RCytoGPS' in R:
install.packages('RCytoGPS', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://r-forge.r-project.org/projects/oompa

Datasets:

On CRAN:

Conda:

2.86 score 18 scripts 213 downloads 7 exports 1 dependencies

Last updated from:26edfef463. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK142
source / vignettesOK207
linux-release-x86_64OK151
wasm-releaseOK141

Exports:barplotChromosomeCytobandDataimageprecleanreadLGFsummary

Dependencies:rjson

RCytoGPS: Working With LGF-Models of Karyotype in R

Dwayne Tally, Zachary B. Abrams, and Kevin R. Coombes

Rendered fromIntroRCytoGPS.Rmdusingknitr::rmarkdownon Mar 30 2026.

Last update: 2021-09-17
Started: 2020-11-19

RCytoGPS Gallery

Dwayne Tally, Zachary B. Abrams, and Kevin R. Coombes

Rendered fromGallery.Rmdusingknitr::rmarkdownon Mar 30 2026.

Last update: 2021-09-17
Started: 2020-11-19

Readme and manuals

Help Manual

Help pageTopics
The 'Chromosome' ClassChromosome Chromosome-class image,Chromosome-method
Example Cytoband Datacytoband-data cytoData
The 'CytobandData' ClassCytobandData CytobandData-class summary,CytobandData-method
Idiogram Graphsbarplot,CytobandData-method Idiogram Graphs image,CytobandData-method
Cytoband LocationscytobandLocations idiocolors
Pre-clean Karyotypespreclean
Extracting LGF karyotype data from JSON filesreadLGF