Package: causalDisco 1.1.0.9000

causalDisco: Tools for Causal Discovery on Observational Data
Tools for causal structure learning from observational data, with emphasis on temporally ordered variables. The package implements the Temporal PeterâClark (TPC) algorithm (Petersen, Osler & EkstrÃļm, 2021; <doi:10.1093/aje/kwab087>), the Temporal Greedy Equivalence Search (TGES) algorithm (Larsen, EkstrÃļm & Petersen, 2025; <doi:10.48550/arXiv.2502.06232>) and Temporal Fast Causal Inference (TFCI). It provides a unified framework for specifying background knowledge, which can be incorporated into the implemented algorithms from the R packages 'bnlearn' (Scutari, 2010; <doi:10.18637/jss.v035.i03>) and 'pcalg' (Kalish et al., 2012; <doi:10.18637/jss.v047.i11>), as well as the Java library 'Tetrad' (Scheines et al., 1998; <doi:10.1207/s15327906mbr3301_3>). The package further includes utilities for visualization, comparison, and evaluation of graph structures, facilitating performance evaluation and methodological studies.
Authors:
causalDisco_1.1.0.9000.tar.gz
causalDisco_1.1.0.9000.zip(r-4.7)causalDisco_1.1.0.9000.zip(r-4.6)causalDisco_1.1.0.9000.zip(r-4.5)
causalDisco_1.1.0.9000.tgz(r-4.6-any)causalDisco_1.1.0.9000.tgz(r-4.5-any)
causalDisco_1.1.0.9000.tar.gz(r-4.6-any)causalDisco_1.1.0.9000.tar.gz(r-4.5-any)
causalDisco_1.1.0.9000.tgz(r-4.5-emscripten)
causalDisco.pdf |causalDisco.html✨
causalDisco/json (API)
NEWS
| # Install 'causalDisco' in R: |
| install.packages('causalDisco', repos = c('https://disco-coders.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/disco-coders/causaldisco/issues
Pkgdown/docs site:https://disco-coders.github.io
- cat_data - Simulated Categorical Data
- cat_data_mcar - Simulated Categorical Data with MCAR
- cat_ord_data - Simulated Ordered Categorical Data
- mix_data - Simulated Mixed Data
- num_data - Simulated Numerical Data
- num_data_latent - Simulated Numerical Data with Latent Variable
- tpc_example - Simulated Life-Course Data
causal-discoverycausal-inference
Last updated from:67c5849875. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 221 | ||
| source / vignettes | OK | 294 | ||
| linux-release-x86_64 | OK | 253 | ||
| macos-release-arm64 | OK | 173 | ||
| macos-oldrel-arm64 | OK | 228 | ||
| windows-devel | OK | 206 | ||
| windows-release | OK | 220 | ||
| windows-oldrel | OK | 202 | ||
| wasm-release | OK | 225 |
Exports:add_exoadd_exogenousadd_tieradd_to_tieradd_varsaidas_bnlearn_knowledgeas_pcalg_constraintsas_tetrad_knowledgeBnlearnSearchbossboss_fciCausalDiscoSearchconfusionconvert_tiers_to_forbiddencor_testdeparse_knowledgediscodistribute_engine_argsevaluatef1_scorefalse_omission_ratefast_iambfcifdrforbid_edgeg1_scoregenerate_dag_datagesget_tiersgfcigraspgrasp_fcigshdiambiamb_fdrinstall_tetradinter_iambknowledgeknowledge_to_caugilist_registered_tetrad_algorithmsmake_methodmake_runnermake_tikznew_disco_methodnpvpcPcalgSearchprecisionrecallreg_testregister_tetrad_algorithmremove_edgeremove_tiersremove_varsreorder_tiersreposition_tierrequire_edgereset_tetrad_alg_registryseq_tiersset_knowledgeshdsim_dagsp_fcispecificityTetradSearchtfcitfci_runtgestges_runtpctpc_rununfreezeverify_tetrad
Dependencies:abindbackportsbdsmatrixBHBiocGenericsBiocManagerbitbit64bnlearnbootbroomcaugicheckmateclicliprclueclustercodetoolscolorspacecorpcorcpp11crayondata.tableDEoptimRdigestdplyrfastICAforcatsforeachgenericsggmglmnetgluegraphgtoolshavenhmsigraphiteratorsjomolatticelifecyclelme4lmtestmagrittrMASSMatrixmicdmiceminqamitmlnlmenloptrnnetnumDerivordinalpanpcalgpillarpkgconfigprettyunitsprogresspurrrR6RBGLrbibutilsRcppRcppArmadilloRcppEigenRcppParallelRdpackreadrreformulasRfastrlangrobustbaserpartS7sfsmiscshapestringistringrsurvivaltibbletidyrtidyselecttzdbucminfutf8vcdvctrsvroomwithrziggzoo
