Package: cifmodeling 0.9.9

cifmodeling: Visualization and Polytomous Modeling of Survival and Competing Risks

A publication-ready toolkit for modern survival and competing risks analysis with a minimal, formula-based interface. Both nonparametric estimation and direct polytomous regression of cumulative incidence functions (CIFs) are supported. The main functions 'cifcurve()', 'cifplot()', and 'cifpanel()' estimate survival and CIF curves and produce high-quality graphics with risk tables, censoring and competing-risk marks, and multi-panel or inset layouts built on 'ggplot2' and 'ggsurvfit'. The modeling function 'polyreg()' performs direct polytomous regression for coherent joint modeling of all cause-specific CIFs to estimate risk ratios, odds ratios, or subdistribution hazard ratios at user-specified time points. All core functions adopt a formula-and-data syntax and return tidy and extensible outputs that integrate smoothly with 'modelsummary', 'broom', and the broader 'tidyverse' ecosystem. Key numerical routines are implemented in C++ via 'Rcpp'.

Authors:Shiro Tanaka [aut, cre, cph], Shigetaka Kobari [ctb], Chisato Honda [ctb]

cifmodeling_0.9.9.tar.gz
cifmodeling_0.9.9.zip(r-4.7)cifmodeling_0.9.9.zip(r-4.6)cifmodeling_0.9.9.zip(r-4.5)
cifmodeling_0.9.9.tgz(r-4.6-x86_64)cifmodeling_0.9.9.tgz(r-4.6-arm64)cifmodeling_0.9.9.tgz(r-4.5-x86_64)cifmodeling_0.9.9.tgz(r-4.5-arm64)
cifmodeling_0.9.9.tar.gz(r-4.6-arm64)cifmodeling_0.9.9.tar.gz(r-4.6-x86_64)cifmodeling_0.9.9.tar.gz(r-4.5-arm64)cifmodeling_0.9.9.tar.gz(r-4.5-x86_64)
cifmodeling_0.9.9.tgz(r-4.5-emscripten)
cifmodeling.pdf |cifmodeling.html
cifmodeling/json (API)
NEWS

# Install 'cifmodeling' in R:
install.packages('cifmodeling', repos = c('https://gestimation.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/gestimation/cifmodeling/issues

Pkgdown/docs site:https://gestimation.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

cpp

6.50 score 3 stars 23 scripts 243 downloads 9 exports 39 dependencies

Last updated from:b194ef0d2a. Checks:11 ERROR, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64ERROR198
linux-devel-x86_64ERROR166
source / vignettesOK442
linux-release-arm64ERROR167
linux-release-x86_64ERROR133
macos-release-arm64ERROR136
macos-release-x86_64ERROR376
macos-oldrel-arm64ERROR129
macos-oldrel-x86_64ERROR186
windows-develERROR163
windows-releaseERROR147
windows-oldrelERROR155
wasm-releaseOK146

Exports:binregRatioLOPcalculatePercentageLOPcifcurvecifpanelcifploteffect_label.polyregEventextract_time_to_eventpolyreg

Dependencies:backportsbootbroomclicpp11dplyrfarvergenericsggplot2ggsurvfitgluegtableisobandlabelinglatticelifecyclemagrittrMatrixnleqslvpatchworkpillarpkgconfigpurrrR6RColorBrewerRcpprlangS7scalesstringistringrsurvivaltibbletidyrtidyselectutf8vctrsviridisLitewithr

Additional information

Rendered fromv6_information.Rmdusingknitr::rmarkdownon Apr 15 2026.

Last update: 2025-12-05
Started: 2025-12-05

Computational formulas in cifcurve()

Rendered fromv3_formulas.Rmdusingknitr::rmarkdownon Apr 15 2026.

Last update: 2025-12-08
Started: 2025-12-05

Direct polytomous regression

Rendered fromv2_polyreg.Rmdusingknitr::rmarkdownon Apr 15 2026.

Last update: 2025-12-05
Started: 2025-12-05

Examples

Rendered fromv4_examples.Rmdusingknitr::rmarkdownon Apr 15 2026.

Last update: 2025-12-05
Started: 2025-12-05

Full lists of arguments

Rendered fromv7_arguments.Rmdusingknitr::rmarkdownon Apr 15 2026.

Last update: 2026-01-06
Started: 2025-12-05

Gallery

Rendered fromv5_gallery.Rmdusingknitr::rmarkdownon Apr 15 2026.

Last update: 2025-12-05
Started: 2025-12-05

Overview

Rendered fromv1_overview.Rmdusingknitr::rmarkdownon Apr 15 2026.

Last update: 2025-12-08
Started: 2025-12-05