Package: cosmicsig 1.1.1
Steven Rozen
cosmicsig: Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer)
A data package with 2 main package variables: 'signature' and 'etiology'. The 'signature' variable contains the latest mutational signature profiles released on COSMIC <https://cancer.sanger.ac.uk/signatures/> for 3 mutation types: * Single base substitutions in the context of preceding and following bases, * Doublet base substitutions, and * Small insertions and deletions. The 'etiology' variable provides the known or hypothesized causes of signatures. 'cosmicsig' stands for COSMIC signatures. Please run ?'cosmicsig' for more information.
Authors:
cosmicsig_1.1.1.tar.gz
cosmicsig_1.1.1.zip(r-4.6)cosmicsig_1.1.1.zip(r-4.5)
cosmicsig_1.1.1.tgz(r-4.6-any)cosmicsig_1.1.1.tgz(r-4.5-any)
cosmicsig_1.1.1.tar.gz(r-4.6-any)cosmicsig_1.1.1.tar.gz(r-4.5-any)
cosmicsig_1.1.1.tgz(r-4.5-emscripten)
cosmicsig.pdf |cosmicsig.html✨
cosmicsig/json (API)
NEWS
| # Install 'cosmicsig' in R: |
| install.packages('cosmicsig', repos = c('https://rozen-lab.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rozen-lab/cosmicsig/issues
- COSMIC_v3.0 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- COSMIC_v3.1 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- COSMIC_v3.2 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- COSMIC_v3.3 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- etiology - List of mutational signatures's proposed etiology summarized from COSMIC, Catalogue Of Somatic Mutations In Cancer
- signature - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
Last updated from:263960e1a9. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 119 | ||
| source / vignettes | OK | 142 | ||
| linux-release-x86_64 | NOTE | 113 | ||
| macos-devel-arm64 | NOTE | 177 | ||
| macos-release-arm64 | NOTE | 154 | ||
| windows-devel | NOTE | 86 | ||
| windows-release | NOTE | 83 | ||
| windows-oldrel | NOTE | 87 | ||
| wasm-release | OK | 105 |
Exports:get_etiologypossible_artifactsrare_signaturesSBS96_ID_to_SBS192_ID
Dependencies:
